Stem-loop ocu-mir-19b-1

Accession

MI0039229

Description

Oryctolagus cuniculus ocu-mir-19b-1 precursor miRNA

Literature search

1 open access papers mention ocu-mir-19b-1
(1 sentences)

Sequence

AGUUUUGCAGGUUUGCAUCCAGCugugugauauucugcUGUGCAAAUCCAUGCAAAACUGA
(((((((((((((((((..((((.............)))))))))).)).)))))))))..

Structure

--         -  -      UC    ugugu 
  AGUUUUGCA GG UUUGCA  CAGC     g
  ||||||||| || ||||||  ||||     a
  UCAAAACGU CC AAACGU  GUcg     u
AG         A  U      --    ucuua 

Annotation confidence Not enough data

Genome context

CM000797.1: 93068307-93068367 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-19b-1

Mature ocu-miR-19b-5p

• Accession: MIMAT0048117
• Description: Oryctolagus cuniculus ocu-miR-19b-5p mature miRNA
• Sequence: 1 - AGUUUUGCAGGUUUGCAUCCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-19b-3p

• Accession: MIMAT0048118
• Description: Oryctolagus cuniculus ocu-miR-19b-3p mature miRNA
• Sequence: 39 - UGUGCAAAUCCAUGCAAAACUGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344