miRBase entry: ocu-mir-19a

Stem-loop ocu-mir-19a

Accession

MI0039228

Description

Oryctolagus cuniculus ocu-mir-19a precursor miRNA

Sequence

AGUUUUGCAUAGUUGCACUACaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGA
((((((((((((((((((((((.......))))...))))))..))))))))))))..

Structure

--            --      ---    ag 
  AGUUUUGCAUAG  UUGCAC   UACa  a
  ||||||||||||  ||||||   ||||  a
  UCAAAACGUAUC  AACGUG   augu  g
AG            UA      Uug    aa

Annotation confidence Not enough data

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Genome context

CM000797.1: 93067987-93068044 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-19a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-19a-5p

Accession	MIMAT0048115
Description	Oryctolagus cuniculus ocu-miR-19a-5p mature miRNA
Sequence	1 - AGUUUUGCAUAGUUGCACUAC - 21
Evidence	experimental Illumina [1]

Mature ocu-miR-19a-3p

Accession	MIMAT0048116
Description	Oryctolagus cuniculus ocu-miR-19a-3p mature miRNA
Sequence	36 - UGUGCAAAUCUAUGCAAAACUGA - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344