Stem-loop ocu-mir-18a

Accession

MI0039226

Description

Oryctolagus cuniculus ocu-mir-18a precursor miRNA

Sequence

UAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuACUGCCCUAAGUGCUCCUUCUGGC
.((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).)))).....

Structure

----U    U    C   U    A   -  aa u 
     AAGG GCAU UAG GCAG UAG ug  g a
     |||| |||| ||| |||| ||| ||  | g
     UUCC CGUG AUC CGUC Auc ac  u a
CGGUC    U    A   C    -   u  ga u 

Annotation confidence Not enough data

Genome context

CM000797.1: 93067839-93067903 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from ocu-mir-18a

Mature ocu-miR-18a-5p

• Accession: MIMAT0048111
• Description: Oryctolagus cuniculus ocu-miR-18a-5p mature miRNA
• Sequence: 1 - UAAGGUGCAUCUAGUGCAGAUAG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-18a-3p

• Accession: MIMAT0048112
• Description: Oryctolagus cuniculus ocu-miR-18a-3p mature miRNA
• Sequence: 42 - ACUGCCCUAAGUGCUCCUUCUGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344