Stem-loop sequence ocu-mir-9-1

Accession

MI0039217 (change log)

Description

Oryctolagus cuniculus miR-9-1 stem-loop

Literature search

1 open access papers mention ocu-mir-9-1
(72 sentences)

Stem-loop

   --uc               g      u  ug 
5'     uuugguuaucuagcu uaugag gg  u
       ||||||||||||||| |||||| ||  g
3'     aagccaauagaucga auacuu cu  g
   auga               a      -  ga 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (OryCun2.0; GCA_000003625.1): CM000802.1: 36488233-36488294 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0039217

Mature sequence ocu-miR-9-5p

• Accession: MIMAT0048095
• Sequence: 1 - ucuuugguuaucuagcuguauga - 23
• Evidence: experimental; Illumina [1]

Mature sequence ocu-miR-9-3p

• Accession: MIMAT0048096
• Sequence: 40 - auaaagcuagauaaccgaaagua - 62
• Evidence: experimental; Illumina [1]

References

1. PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).