miRBase entry: dno-mir-541

Stem-loop dno-mir-541

Accession

MI0039150

Description

Dasypus novemcinctus dno-mir-541 precursor miRNA

Sequence

AAAGGAUUCUGCUGUCGGUCCCACUccaaaguuugcaaaaugggUGGUGGGCACAGAAUCCAGACU
...((((((((.((((.(..((((.(((............)))))))).)))))))))))).....

Structure

--AAA        C    G UC    U   aaguu 
     GGAUUCUG UGUC G  CCAC cca     u
     |||||||| |||| |  |||| |||      
     CCUAAGAC ACGG U  GGUg ggu     g
UCAGA        -    G --    -   aaaac

Annotation confidence Not enough data

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Genome context

JH578221.1: 164635-164700 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from dno-mir-541

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-541-5p

Accession	MIMAT0047967
Description	Dasypus novemcinctus dno-miR-541-5p mature miRNA
Sequence	1 - AAAGGAUUCUGCUGUCGGUCCCACU - 25
Evidence	experimental Illumina [1]

Mature dno-miR-541-3p

Accession	MIMAT0047968
Description	Dasypus novemcinctus dno-miR-541-3p mature miRNA
Sequence	45 - UGGUGGGCACAGAAUCCAGACU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344