miRBase entry: dno-mir-500a

Stem-loop dno-mir-500a


Accession
MI0039135
Description
Dasypus novemcinctus dno-mir-500a precursor miRNA


Sequence

UAAUCCUUGCUACCUGGGUGAGAGUgcugucugaaugcaAUGCACCUGGGCAAGGAUUCGG
.(((((((((...(((((((....(((.........)))...))))))))))))))))...

Structure
--U         UAC       AGAG   ugu 
   AAUCCUUGC   CUGGGUG    Ugc   c
   |||||||||   |||||||    |||   u
   UUAGGAACG   GGUCCAC    acg   g
GGC         ---       -GUA   uaa 


Annotation confidence Not enough data
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Genome context
JH569306.1: 1548488-1548548 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from dno-mir-500a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-500a-5p

Accession MIMAT0047938
Description Dasypus novemcinctus dno-miR-500a-5p mature miRNA
Sequence 1 - UAAUCCUUGCUACCUGGGUGAGAGU - 25
Evidence experimental
Illumina [1]

Mature dno-miR-500a-3p

Accession MIMAT0047939
Description Dasypus novemcinctus dno-miR-500a-3p mature miRNA
Sequence 40 - AUGCACCUGGGCAAGGAUUCGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344