miRBase entry: dno-mir-449c

Stem-loop dno-mir-449c

Accession

MI0039113

Description

Dasypus novemcinctus dno-mir-449c precursor miRNA

Sequence

AGGCAGUGCUUUGCUAGCUGGCUGUUauaauuuuauuuuaaCAGUUGCUAGUUGCACUCCCCU
.((.(((((...((((((.((((((((...........)))))))))))))).))))).))..

Structure

-A  C     UUU      U        uaau 
  GG AGUGC   GCUAGC GGCUGUUa    u
  || |||||   |||||| ||||||||    u
  CC UCACG   UGAUCG UUGACaau    u
UC  C     --U      -        uuua

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH582746.1: 1407143-1407205 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dno-mir-449c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-449c-5p

Accession	MIMAT0047895
Description	Dasypus novemcinctus dno-miR-449c-5p mature miRNA
Sequence	1 - AGGCAGUGCUUUGCUAGCUGGCUGUU - 26
Evidence	experimental Illumina [1]

Mature dno-miR-449c-3p

Accession	MIMAT0047896
Description	Dasypus novemcinctus dno-miR-449c-3p mature miRNA
Sequence	42 - CAGUUGCUAGUUGCACUCCCCU - 63
Evidence	not_experimental

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344