miRBase entry: dno-mir-409

Stem-loop dno-mir-409


Accession
MI0039100
Description
Dasypus novemcinctus dno-mir-409 precursor miRNA


Sequence

ugguacgcggggagAGGUUACCCGAGCAACUUUGCAUCuggacgacGAAUGUUGCUCGGUGAACCCCUcuucgguauca
((((((.(((((((.((((..((((((((((((((........).)))).)))))))))..)))).)))))))))))))

Structure
      g       A    AC         -    - AUC 
ugguac cggggag GGUU  CCGAGCAAC UUUG C   u
|||||| ||||||| ||||  ||||||||| |||| |    
acuaug gcuucUC CCAA  GGCUCGUUG AAGc g   g
      -       C    GU         U    a cag 


Annotation confidence Not enough data
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Genome context
JH578221.1: 165404-165482 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from dno-mir-409
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-409-5p

Accession MIMAT0047870
Description Dasypus novemcinctus dno-miR-409-5p mature miRNA
Sequence 15 - AGGUUACCCGAGCAACUUUGCAUC - 38
Evidence experimental
Illumina [1]

Mature dno-miR-409-3p

Accession MIMAT0047871
Description Dasypus novemcinctus dno-miR-409-3p mature miRNA
Sequence 47 - GAAUGUUGCUCGGUGAACCCCU - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344