miRBase entry: dno-mir-380

Stem-loop dno-mir-380

Accession

MI0039096

Description

Dasypus novemcinctus dno-mir-380 precursor miRNA

Sequence

AUGGUUGACCAUAGAACAUGCGcugucucugugucgUAUGUAAUAUGGUCCACGUCUu
...((.(((((((..((((((((.........).)))))))..))))))).)).....

Structure

--AUG  U       GA       - ugu 
     GU GACCAUA  ACAUGCG c   c
     || |||||||  ||||||| |   u
     CA CUGGUAU  UGUAUgc g   c
uUCUG  C       AA       u ugu

Annotation confidence Not enough data

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Genome context

JH578221.1: 127474-127531 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from dno-mir-380

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-380-5p

Accession	MIMAT0047862
Description	Dasypus novemcinctus dno-miR-380-5p mature miRNA
Sequence	1 - AUGGUUGACCAUAGAACAUGCG - 22
Evidence	experimental Illumina [1]

Mature dno-miR-380-3p

Accession	MIMAT0047863
Description	Dasypus novemcinctus dno-miR-380-3p mature miRNA
Sequence	37 - UAUGUAAUAUGGUCCACGUCU - 57
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344