miRBase entry: dno-mir-379

Stem-loop dno-mir-379


Accession
MI0039095
Description
Dasypus novemcinctus dno-mir-379 precursor miRNA


Sequence

UGGUAGACUAUGGAACGUAGGcuuugugauuuuugaccUAUGUAACAUGGUCCACUAAC
((((.(((((((..((((((((............).)))))))..))))))).))))..

Structure
--    A       GA       - uuugu 
  UGGU GACUAUG  ACGUAGG c     g
  |||| |||||||  ||||||| |      
  AUCA CUGGUAC  UGUAUcc g     a
CA    C       AA       a uuuuu 


Annotation confidence Not enough data
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Genome context
JH578221.1: 124581-124639 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from dno-mir-379
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-379-5p

Accession MIMAT0047860
Description Dasypus novemcinctus dno-miR-379-5p mature miRNA
Sequence 1 - UGGUAGACUAUGGAACGUAGG - 21
Evidence experimental
Illumina [1]

Mature dno-miR-379-3p

Accession MIMAT0047861
Description Dasypus novemcinctus dno-miR-379-3p mature miRNA
Sequence 39 - UAUGUAACAUGGUCCACUAAC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344