miRBase entry: dno-mir-222

Stem-loop dno-mir-222


Accession
MI0039053
Description
Dasypus novemcinctus dno-mir-222 precursor miRNA


Sequence

GGCUCAGUAGCCAGUGUAGAUCCugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGUCUC
(((((((((((((((((((...(((...........)))...))))).))))))))))))))..

Structure
--              -     AUC   ucuu 
  GGCUCAGUAGCCAG UGUAG   Cug    u
  |||||||||||||| |||||   |||    u
  CUGGGUCAUCGGUC ACAUC   gac    g
CU              U     GAc   uaau 


Annotation confidence Not enough data
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Genome context
JH568173.1: 139430-139493 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-222
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-222-5p

Accession MIMAT0047777
Description Dasypus novemcinctus dno-miR-222-5p mature miRNA
Sequence 1 - GGCUCAGUAGCCAGUGUAGAUCC - 23
Evidence experimental
Illumina [1]

Mature dno-miR-222-3p

Accession MIMAT0047778
Description Dasypus novemcinctus dno-miR-222-3p mature miRNA
Sequence 41 - AGCUACAUCUGGCUACUGGGUCUC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344