miRBase entry: dno-mir-200b

Stem-loop dno-mir-200b


Accession
MI0039034
Description
Dasypus novemcinctus dno-mir-200b precursor miRNA


Sequence

CAUCUUACUGGGCAGCAUUGGAuggugucuggucucUAAUACUGCCUGGUAACGAUGAC
(((((((((((((((.((((((.((.......)))))))).))))))))))).))))..

Structure
--    -           C      u  ug 
  CAUC UUACUGGGCAG AUUGGA gg  u
  |||| ||||||||||| |||||| ||  c
  GUAG AAUGGUCCGUC UAAUcu cu  u
CA    C           A      -  gg 


Annotation confidence Not enough data
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Genome context
JH582619.1: 456846-456904 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-200b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-200b-5p

Accession MIMAT0047740
Description Dasypus novemcinctus dno-miR-200b-5p mature miRNA
Sequence 1 - CAUCUUACUGGGCAGCAUUGGA - 22
Evidence experimental
Illumina [1]

Mature dno-miR-200b-3p

Accession MIMAT0047741
Description Dasypus novemcinctus dno-miR-200b-3p mature miRNA
Sequence 37 - UAAUACUGCCUGGUAACGAUGAC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344