miRBase entry: dno-mir-133a-1

Stem-loop dno-mir-133a-1


Accession
MI0038977
Description
Dasypus novemcinctus dno-mir-133a-1 precursor miRNA


Sequence

GCUGGUAAAAUGGAACCAAAUCagcuguuggauggaUUUGGUCCCCUUCAACCAGCUGU
((((((..((.((.((((((((..(....)....)))))))).)).))..))))))...

Structure
---      AA  U  A        --ag u 
   GCUGGU  AA GG ACCAAAUC    c g
   ||||||  || || ||||||||    |  
   CGACCA  UU CC UGGUUUag    g u
UGU      AC  C  C        guag u 


Annotation confidence Not enough data
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Genome context
JH567234.1: 201888-201946 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-133a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-133a-5p

Accession MIMAT0047633
Description Dasypus novemcinctus dno-miR-133a-5p mature miRNA
Sequence 1 - GCUGGUAAAAUGGAACCAAAUC - 22
Evidence experimental
Illumina [1]

Mature dno-miR-133a-3p

Accession MIMAT0047634
Description Dasypus novemcinctus dno-miR-133a-3p mature miRNA
Sequence 37 - UUUGGUCCCCUUCAACCAGCUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344