miRBase entry: dno-mir-29c

Stem-loop dno-mir-29c


Accession
MI0038933
Description
Dasypus novemcinctus dno-mir-29c precursor miRNA


Sequence

GACCGAUUUCUCCUGGUGUUCAGagucuguuuuugucUAGCACCAUUUGAAAUCGGUUAu
((((((((((...(((((((.(((...........))))))))))...))))))))))..

Structure
--          UCC       C   gucu 
  GACCGAUUUC   UGGUGUU AGa    g
  ||||||||||   ||||||| |||    u
  UUGGCUAAAG   ACCACGA Ucu    u
uA          UUU       -   guuu 


Annotation confidence Not enough data
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Genome context
JH570311.1: 1651549-1651608 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dno-mir-29c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-29c-5p

Accession MIMAT0047554
Description Dasypus novemcinctus dno-miR-29c-5p mature miRNA
Sequence 1 - GACCGAUUUCUCCUGGUGUUCAG - 23
Evidence not_experimental

Mature dno-miR-29c-3p

Accession MIMAT0047555
Description Dasypus novemcinctus dno-miR-29c-3p mature miRNA
Sequence 38 - UAGCACCAUUUGAAAUCGGUUA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344