miRBase entry: dno-mir-20a

Stem-loop dno-mir-20a


Accession
MI0038915
Description
Dasypus novemcinctus dno-mir-20a precursor miRNA

Literature search
1 open access papers mention dno-mir-20a
(5 sentences)

Sequence

UAAAGUGCUUAUAGUGCAGGUAGuguuuaguuaucuACUGCAUUAUGAGCACUUAAAGU
..(((((((((((((((((.(((...........)))))))))))))))))))).....

Structure
---UA                 G   uguu 
     AAGUGCUUAUAGUGCAG UAG    u
     ||||||||||||||||| |||    a
     UUCACGAGUAUUACGUC Auc    g
UGAAA                 -   uauu 


Annotation confidence Not enough data
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Genome context
JH570327.1: 92793-92851 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from dno-mir-20a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dno-miR-20a-5p

Accession MIMAT0047520
Description Dasypus novemcinctus dno-miR-20a-5p mature miRNA
Sequence 1 - UAAAGUGCUUAUAGUGCAGGUAG - 23
Evidence experimental
Illumina [1]

Mature dno-miR-20a-3p

Accession MIMAT0047521
Description Dasypus novemcinctus dno-miR-20a-3p mature miRNA
Sequence 37 - ACUGCAUUAUGAGCACUUAAAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344