miRBase entry: cpo-mir-874

Stem-loop cpo-mir-874


Accession
MI0038846
Description
Cavia porcellus cpo-mir-874 precursor miRNA


Sequence

CGGCCCCACGCACCAGGGUAAGAgagacucacuucCUGCCCUGGCCCGAGGGACCGAC
(((.(((.((..((((((((.(((........))).))))))))..)).))).)))..

Structure
--   C   A  CA        A   aga 
  CGG CCC CG  CCAGGGUA GAg   c
  ||| ||| ||  |||||||| |||    
  GCC GGG GC  GGUCCCGU cuu   u
CA   A   A  CC        C   cac 


Annotation confidence Not enough data
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Genome context
DS562872.1: 26200294-26200351 [-]

Database links

Mature cpo-miR-874-5p

Accession MIMAT0047393
Description Cavia porcellus cpo-miR-874-5p mature miRNA
Sequence 1 - CGGCCCCACGCACCAGGGUAAGA - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-874-3p

Accession MIMAT0047394
Description Cavia porcellus cpo-miR-874-3p mature miRNA
Sequence 36 - CUGCCCUGGCCCGAGGGACCGAC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344