miRBase entry: cpo-mir-676

Stem-loop cpo-mir-676


Accession
MI0038837
Description
Cavia porcellus cpo-mir-676 precursor miRNA


Sequence

UCUUCAACCUGAGGACUCGCAggguaaauggaaugCCGUCCUUUGGUUGUUGAGU
((..(((((.((((((..(((............))).)))))).)))))..))..

Structure
--  UU     U      UC   gggua 
  UC  CAACC GAGGAC  GCA     a
  ||  ||||| ||||||  |||      
  AG  GUUGG UUCCUG  Cgu     a
UG  UU     U      -C   aaggu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
DS562881.1: 27706144-27706198 [-]

Database links

Mature cpo-miR-676-5p

Accession MIMAT0047375
Description Cavia porcellus cpo-miR-676-5p mature miRNA
Sequence 1 - UCUUCAACCUGAGGACUCGCA - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-676-3p

Accession MIMAT0047376
Description Cavia porcellus cpo-miR-676-3p mature miRNA
Sequence 36 - CCGUCCUUUGGUUGUUGAGU - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344