miRBase entry: cpo-mir-615

Stem-loop cpo-mir-615


Accession
MI0038826
Description
Cavia porcellus cpo-mir-615 precursor miRNA


Sequence

GGGGGUCCCCGGUGCUCGGAUCucgagagugcuuauuguucggUCCGAGCCUGGGUCUCCCUCUU
(((((..(((((.(((((((((..((.(((....))).)).)))))))))))))).)))))....

Structure
----     UC     U         uc  g   g 
    GGGGG  CCCGG GCUCGGAUC  ga agu c
    |||||  ||||| |||||||||  || |||  
    CCCUC  GGGUC CGAGCCUgg  uu uua u
UUCU     -U     -         -c  g   u 


Annotation confidence Not enough data
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Genome context
DS562864.1: 45777679-45777743 [-]

Database links

Mature cpo-miR-615-5p

Accession MIMAT0047353
Description Cavia porcellus cpo-miR-615-5p mature miRNA
Sequence 1 - GGGGGUCCCCGGUGCUCGGAUC - 22
Evidence not_experimental

Mature cpo-miR-615-3p

Accession MIMAT0047354
Description Cavia porcellus cpo-miR-615-3p mature miRNA
Sequence 44 - UCCGAGCCUGGGUCUCCCUCUU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344