miRBase entry: cpo-mir-495

Stem-loop cpo-mir-495

Accession

MI0038795

Description

Cavia porcellus cpo-mir-495 precursor miRNA

Literature search

1 open access papers mention cpo-mir-495
(2 sentences)

Sequence

GAAGCUGCCCAUGUUAUUUUCGcuuuauaugugacgAAACAAACAUGGUGCACUUCUU
((((.((((((((((..((((((.........).)))))..))))))).)))))))..

Structure

--    C   -       AU     - uuu 
  GAAG UGC CCAUGUU  UUUCG c   a
  |||| ||| |||||||  ||||| |   u
  CUUC ACG GGUACAA  AAAgc g   a
UU    -   U       AC     a ugu

Annotation confidence Not enough data

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Genome context

DS562966.1: 1091798-1091855 [+]

Clustered miRNAs

21 other miRNAs are < 10 kb from cpo-mir-495

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-495-5p

Accession	MIMAT0047291
Description	Cavia porcellus cpo-miR-495-5p mature miRNA
Sequence	1 - GAAGCUGCCCAUGUUAUUUUCG - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-495-3p

Accession	MIMAT0047292
Description	Cavia porcellus cpo-miR-495-3p mature miRNA
Sequence	37 - AAACAAACAUGGUGCACUUCUU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344