miRBase entry: cpo-mir-486

Stem-loop cpo-mir-486


Accession
MI0038788
Description
Cavia porcellus cpo-mir-486 precursor miRNA


Sequence

UCCUGUACUGAGCUGCCCCGAGgcccuuccuugugccccgcuCGGGGCAGCUCAGUACAGGAUG
((((((((((((((((((((((((.(......).)))....)))))))))))))))))))))..

Structure
--                     ----   c uu 
  UCCUGUACUGAGCUGCCCCGA    Ggc c  c
  |||||||||||||||||||||    ||| |   
  AGGACAUGACUCGACGGGGCu    ccg g  c
GU                     cgcc   u uu 


Annotation confidence Not enough data
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Genome context
DS562935.1: 1296162-1296225 [+]

Database links

Mature cpo-miR-486-5p

Accession MIMAT0047277
Description Cavia porcellus cpo-miR-486-5p mature miRNA
Sequence 1 - UCCUGUACUGAGCUGCCCCGAG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-486-3p

Accession MIMAT0047278
Description Cavia porcellus cpo-miR-486-3p mature miRNA
Sequence 43 - CGGGGCAGCUCAGUACAGGAUG - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344