miRBase entry: cpo-mir-483

Stem-loop cpo-mir-483


Accession
MI0038786
Description
Cavia porcellus cpo-mir-483 precursor miRNA


Sequence

AAGACGGGAGAAGAGAAGGGAGugguuaaugcgacuccuCACUCCUCCCCUCCCGUCUUGU
((((((((((..(((.(((((((.((....)).)))))...)).)))..))))))))))..

Structure
--          AA   A  ---     g  u 
  AAGACGGGAG  GAG AG   GGAGu gu a
  ||||||||||  ||| ||   ||||| ||  
  UUCUGCCCUC  CUC UC   ccuca cg a
UG          CC   C  ACu     g  u 


Annotation confidence Not enough data
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Genome context
DS562897.1: 12421632-12421692 [+]

Database links

Mature cpo-miR-483-5p

Accession MIMAT0047273
Description Cavia porcellus cpo-miR-483-5p mature miRNA
Sequence 1 - AAGACGGGAGAAGAGAAGGGAG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-483-3p

Accession MIMAT0047274
Description Cavia porcellus cpo-miR-483-3p mature miRNA
Sequence 40 - CACUCCUCCCCUCCCGUCUUGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344