miRBase entry: cpo-mir-429

Stem-loop cpo-mir-429

Accession

MI0038772

Description

Cavia porcellus cpo-mir-429 precursor miRNA

Sequence

GUCUUACCAGACACGGUUAGAucuggaugcuucugucUAAUACUGUCUGGUAAUGCCGU
((.((((((((((..(((((((..(((....))))))))))..)))))))))).))...

Structure

---  C          CG       cu   u 
   GU UUACCAGACA  GUUAGAu  gga g
   || ||||||||||  |||||||  |||  
   CG AAUGGUCUGU  UAAUcug  ucu c
UGC  U          CA       --   u

Annotation confidence Not enough data

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Genome context

DS563041.1: 1148974-1149032 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-429

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-429-5p

Accession	MIMAT0047247
Description	Cavia porcellus cpo-miR-429-5p mature miRNA
Sequence	1 - GUCUUACCAGACACGGUUAGA - 21
Evidence	not_experimental

Mature cpo-miR-429-3p

Accession	MIMAT0047248
Description	Cavia porcellus cpo-miR-429-3p mature miRNA
Sequence	38 - UAAUACUGUCUGGUAAUGCCGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344