miRBase entry: cpo-mir-425

Stem-loop cpo-mir-425


Accession
MI0038771
Description
Cavia porcellus cpo-mir-425 precursor miRNA


Sequence

AAUGACACGAUCACUCCCGUUGAGugggcacccaagaagccAUCGGGAAUGUCGUGUCCGCCC
...(((((((.((.(((((....((((............))))))))).))))))))).....

Structure
--AAU       U  C     UUGA    gcacc 
     GACACGA CA UCCCG    Gugg     c
     ||||||| || |||||    ||||      
     CUGUGCU GU AGGGC    UAcc     a
CCCGC       -  A     ----    gaaga 


Annotation confidence Not enough data
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Genome context
DS562863.1: 24185548-24185610 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cpo-mir-425
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-425-5p

Accession MIMAT0047245
Description Cavia porcellus cpo-miR-425-5p mature miRNA
Sequence 1 - AAUGACACGAUCACUCCCGUUGAG - 24
Evidence experimental
Illumina [1]

Mature cpo-miR-425-3p

Accession MIMAT0047246
Description Cavia porcellus cpo-miR-425-3p mature miRNA
Sequence 42 - AUCGGGAAUGUCGUGUCCGCCC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344