miRBase entry: cpo-mir-375

Stem-loop cpo-mir-375


Accession
MI0038752
Description
Cavia porcellus cpo-mir-375 precursor miRNA


Sequence

GCGACGAGCCCCUCGCACAAACCggaccugagcguUUUGUUCGUUCGGCUCGCGUGA
(((.((((((...((.(((((.((........)).))))).))...)))))))))..

Structure
--   A      CCU  C     C  gac 
  GCG CGAGCC   CG ACAAA Cg   c
  ||| ||||||   || ||||| ||    
  UGC GCUCGG   GC UGUUU gc   u
AG   -      CUU  U     u  gag 


Annotation confidence Not enough data
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Genome context
DS562944.1: 6176389-6176445 [+]

Database links

Mature cpo-miR-375-5p

Accession MIMAT0047207
Description Cavia porcellus cpo-miR-375-5p mature miRNA
Sequence 1 - GCGACGAGCCCCUCGCACAAACC - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-375-3p

Accession MIMAT0047208
Description Cavia porcellus cpo-miR-375-3p mature miRNA
Sequence 36 - UUUGUUCGUUCGGCUCGCGUGA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344