miRBase entry: cpo-mir-338

Stem-loop cpo-mir-338


Accession
MI0038735
Description
Cavia porcellus cpo-mir-338 precursor miRNA


Sequence

AACAAUAUCCUGGUGCUGAGUgaugacacaggcaacUCCAGCAUCAGUGAUUUUGUUGA
(((((.(((((((((((((((.............))).))))))))).))).)))))..

Structure
--     U   -         -   gauga 
  AACAA AUC CUGGUGCUG AGU     c
  ||||| ||| ||||||||| |||     a
  UUGUU UAG GACUACGAC Uca     c
AG     U   U         C   acgga 


Annotation confidence Not enough data
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Genome context
DS562931.1: 5706537-5706595 [-]

Database links

Mature cpo-miR-338-5p

Accession MIMAT0047174
Description Cavia porcellus cpo-miR-338-5p mature miRNA
Sequence 1 - AACAAUAUCCUGGUGCUGAGU - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-338-3p

Accession MIMAT0047175
Description Cavia porcellus cpo-miR-338-3p mature miRNA
Sequence 37 - UCCAGCAUCAGUGAUUUUGUUGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344