miRBase entry: cpo-mir-331

Stem-loop cpo-mir-331


Accession
MI0038732
Description
Cavia porcellus cpo-mir-331 precursor miRNA


Sequence

CUAGGUAUGGUCCCAGGGAUCCcagauccaaccagGCCCCUGGGCCUAUCCUAGAA
(((((.((((.(((((((...((...........)).))))))).)))))))))..

Structure
--     U    U       AUC  agau 
  CUAGG AUGG CCCAGGG   Cc    c
  ||||| |||| |||||||   ||    c
  GAUCC UAUC GGGUCCC   Gg    a
AA     -    C       --C  acca 


Annotation confidence Not enough data
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Genome context
DS562864.1: 6259331-6259386 [-]

Database links

Mature cpo-miR-331-5p

Accession MIMAT0047168
Description Cavia porcellus cpo-miR-331-5p mature miRNA
Sequence 1 - CUAGGUAUGGUCCCAGGGAUCC - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-331-3p

Accession MIMAT0047169
Description Cavia porcellus cpo-miR-331-3p mature miRNA
Sequence 36 - GCCCCUGGGCCUAUCCUAGAA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344