miRBase entry: cpo-mir-217

Stem-loop cpo-mir-217

Accession

MI0038709

Description

Cavia porcellus cpo-mir-217 precursor miRNA

Sequence

AUACUGCAUCAGGAACUGAUUGgauaagaaucagucaccAUCAGUUCCUAAUGCAUUGCCU
....(((((.((((((((((.((((........))).).)))))))))).)))))......

Structure

--AUAC     C          U -   aag 
      UGCAU AGGAACUGAU G gau   a
      ||||| |||||||||| | |||    
      ACGUA UCCUUGACUA c cug   a
UCCGUU     A          c a   acu

Annotation confidence Not enough data

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Genome context

DS562903.1: 8653829-8653889 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-217

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-217-5p

Accession	MIMAT0047123
Description	Cavia porcellus cpo-miR-217-5p mature miRNA
Sequence	1 - AUACUGCAUCAGGAACUGAUUG - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-217-3p

Accession	MIMAT0047124
Description	Cavia porcellus cpo-miR-217-3p mature miRNA
Sequence	40 - AUCAGUUCCUAAUGCAUUGCCU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344