Stem-loop sequence cpo-mir-199-2

AccessionMI0038690 (change log)
DescriptionCavia porcellus miR-199-2 stem-loop
Stem-loop 
   --c       u        c   --uca  ac 
5'    ccagugu cagacuac ugu     gg  a
      ||||||| |||||||| |||     ||   
3'    gguuaca gucugaug aca     cc  a
   auu       c        -   uguug  gu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (cavPor3; GCA_000151735.1) Overlapping transcripts
DS562867.1: 11462616-11462676 [+]
intergenic
Clustered miRNAs
< 10kb from cpo-mir-199-2
cpo-mir-199-2DS562867.1: 11462616-11462676 [+]
cpo-mir-214DS562867.1: 11468170-11468232 [+]
Database links

Mature sequence cpo-miR-199-5p

Accession MIMAT0047086
Sequence

1 -  

cccaguguucagacuaccuguuc

 - 23

Get sequence
Evidence experimental; Illumina [1]

Mature sequence cpo-miR-199-3p

Accession MIMAT0047087
Sequence

40 -  

acaguagucugcacauugguua

 - 61

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:26733575 "The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference" Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D Genome Biol Evol. 8:330-344(2016).