miRBase entry: cpo-mir-196b

Stem-loop cpo-mir-196b


Accession
MI0038687
Description
Cavia porcellus cpo-mir-196b precursor miRNA


Sequence

UAGGUAGUUUCCUGUUGUUGGGAuccaccuuucucUCGACAGCACGACACUGCCUUCA
.(((((((.((.(((((((((((..........))))))))))).)).)))))))...

Structure
--U       U  C           ucca 
   AGGUAGU UC UGUUGUUGGGA    c
   ||||||| || |||||||||||     
   UCCGUCA AG ACGACAGCUcu    c
ACU       C  C           cuuu 


Annotation confidence Not enough data
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Genome context
DS562899.1: 3907441-3907498 [-]

Database links

Mature cpo-miR-196b-5p

Accession MIMAT0047082
Description Cavia porcellus cpo-miR-196b-5p mature miRNA
Sequence 1 - UAGGUAGUUUCCUGUUGUUGGGA - 23
Evidence experimental
Illumina [1]

Mature cpo-miR-196b-3p

Accession MIMAT0047083
Description Cavia porcellus cpo-miR-196b-3p mature miRNA
Sequence 36 - UCGACAGCACGACACUGCCUUCA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344