miRBase entry: cpo-mir-195

Stem-loop cpo-mir-195

Accession

MI0038684

Description

Cavia porcellus cpo-mir-195 precursor miRNA

Sequence

UAGCAGCACAGAAAUAUUGGCAcugggaagcaagucugCCAAUAUUGGUUGUGCUGCUCCA
.((((((((((.((((((((((((........)))..)))))))))..))))))))))...

Structure

--U          -A         --   ggg 
   AGCAGCACAG  AAUAUUGGC  Acu   a
   ||||||||||  |||||||||  |||    
   UCGUCGUGUU  UUAUAACCg  uga   a
ACC          GG         uc   acg

Annotation confidence Not enough data

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Genome context

DS562916.1: 9617085-9617145 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-195

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-195-5p

Accession	MIMAT0047076
Description	Cavia porcellus cpo-miR-195-5p mature miRNA
Sequence	1 - UAGCAGCACAGAAAUAUUGGCA - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-195-3p

Accession	MIMAT0047077
Description	Cavia porcellus cpo-miR-195-3p mature miRNA
Sequence	39 - CCAAUAUUGGUUGUGCUGCUCCA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344