miRBase entry: cpo-mir-148b

Stem-loop cpo-mir-148b


Accession
MI0038657
Description
Cavia porcellus cpo-mir-148b precursor miRNA


Sequence

GAAGUUCUGUUAUACACUCAGGCUguggcucucugaaagUCAGUGCAUCACAGAACUUUGU
((((((((((.((.((((..((((.............)))))))).)).))))))))))..

Structure
--          U  A    CA    guggc 
  GAAGUUCUGU AU CACU  GGCU     u
  |||||||||| || ||||  ||||     c
  UUUCAAGACA UA GUGA  CUga     u
UG          C  C    --    aaguc 


Annotation confidence Not enough data
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Genome context
DS562864.1: 45498342-45498402 [-]

Database links

Mature cpo-miR-148b-5p

Accession MIMAT0047024
Description Cavia porcellus cpo-miR-148b-5p mature miRNA
Sequence 1 - GAAGUUCUGUUAUACACUCAGGCU - 24
Evidence experimental
Illumina [1]

Mature cpo-miR-148b-3p

Accession MIMAT0047025
Description Cavia porcellus cpo-miR-148b-3p mature miRNA
Sequence 40 - UCAGUGCAUCACAGAACUUUGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344