miRBase entry: cpo-mir-134

Stem-loop cpo-mir-134

Accession

MI0038639

Description

Cavia porcellus cpo-mir-134 precursor miRNA

Sequence

UGUGACUGGUUGACCAGAGGGGcaugcacuguguucaccCUGUGGGCCACCUAGUCACCAA
.((((((((.((.(((.((((((((.....))))...)))).)))..)).))))))))...

Structure

--U        U  -A   G    ---    g 
   GUGACUGG UG  CCA AGGG   Gcau c
   |||||||| ||  ||| ||||   |||| a
   CACUGAUC AC  GGU UCcc   ugug c
AAC        C  CG   G    acu    u

Annotation confidence Not enough data

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Genome context

DS562966.1: 1107399-1107459 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cpo-mir-134

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-134-5p

Accession	MIMAT0046990
Description	Cavia porcellus cpo-miR-134-5p mature miRNA
Sequence	1 - UGUGACUGGUUGACCAGAGGGG - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-134-3p

Accession	MIMAT0046991
Description	Cavia porcellus cpo-miR-134-3p mature miRNA
Sequence	40 - CUGUGGGCCACCUAGUCACCAA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344