miRBase entry: cpo-mir-23b

Stem-loop cpo-mir-23b


Accession
MI0038576
Description
Cavia porcellus cpo-mir-23b precursor miRNA


Sequence

GGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAC
((((((((((((((.((((((..............)))))))).))))))))))..))..

Structure
--  --          -  C      gugacu 
  GG  GUUCCUGGCA UG UGAUUU      u
  ||  |||||||||| || ||||||       
  CC  UAGGGACCGU AC ACUAaa      a
CA  AU          U  -      auuaga 


Annotation confidence Not enough data
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Genome context
DS562897.1: 4055809-4055868 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cpo-mir-23b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-23b-5p

Accession MIMAT0046878
Description Cavia porcellus cpo-miR-23b-5p mature miRNA
Sequence 1 - GGGUUCCUGGCAUGCUGAUUU - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-23b-3p

Accession MIMAT0046879
Description Cavia porcellus cpo-miR-23b-3p mature miRNA
Sequence 38 - AUCACAUUGCCAGGGAUUACCAC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344