miRBase entry: cpo-mir-19a

Stem-loop cpo-mir-19a


Accession
MI0038568
Description
Cavia porcellus cpo-mir-19a precursor miRNA


Sequence

AGUUUUGCAUAGUUGCACUACaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGA
((((((((((((((((((((((.......))))...))))))..))))))))))))..

Structure
--            --      ---    ag 
  AGUUUUGCAUAG  UUGCAC   UACa  a
  ||||||||||||  ||||||   ||||  a
  UCAAAACGUAUC  AACGUG   augu  g
AG            UA      Uug    aa 


Annotation confidence Not enough data
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Genome context
DS562860.1: 32029133-32029190 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cpo-mir-19a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-19a-5p

Accession MIMAT0046863
Description Cavia porcellus cpo-miR-19a-5p mature miRNA
Sequence 1 - AGUUUUGCAUAGUUGCACUAC - 21
Evidence experimental
Illumina [1]

Mature cpo-miR-19a-3p

Accession MIMAT0046864
Description Cavia porcellus cpo-miR-19a-3p mature miRNA
Sequence 36 - UGUGCAAAUCUAUGCAAAACUGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344