miRBase entry: cpo-mir-15a

Stem-loop cpo-mir-15a


Accession
MI0038561
Description
Cavia porcellus cpo-mir-15a precursor miRNA


Sequence

UAGCAGCACAUAAUGGUUUGUGgauuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCAaaaauacaa
..((((((((..((((((((((.............))))))))))..)))))))).............

Structure
-----------UA        UA          gauuu 
             GCAGCACA  AUGGUUUGUG     u
             ||||||||  ||||||||||     g
             CGUCGUGU  UACCGGACgu     a
aacauaaaaACUC        UA          ggaaa 


Annotation confidence Not enough data
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Genome context
DS562861.1: 59875526-59875593 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cpo-mir-15a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cpo-miR-15a-5p

Accession MIMAT0046849
Description Cavia porcellus cpo-miR-15a-5p mature miRNA
Sequence 1 - UAGCAGCACAUAAUGGUUUGUG - 22
Evidence experimental
Illumina [1]

Mature cpo-miR-15a-3p

Accession MIMAT0046850
Description Cavia porcellus cpo-miR-15a-3p mature miRNA
Sequence 38 - CAGGCCAUAUUGUGCUGCCUCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344