miRBase entry: bta-mir-12057

Stem-loop bta-mir-12057


Accession
MI0038490
Description
Bos taurus bta-mir-12057 precursor miRNA


Sequence

23 reads, 5 reads per million, 3 experiments
ACUGGGAGUGGAAGGAGAGCCcagagguuuccagggacugguccugaccucucccuucccuccccacag
...(((((.((((((((((..(((.((...((((...)))))))))..)))).))))))))))).....

Structure
--ACU     U      -    CC   a  uuu    g 
     GGGAG GGAAGG AGAG  cag gg   ccag  
     ||||| |||||| ||||  ||| ||   |||| g
     cccuc ccuucc ucuc  guc cu   gguc  
gacac     -      c    ca   -  ---    a 


Annotation confidence Not enough data
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Genome context
chr18: 50491100-50491168 [+]

Database links

Mature bta-miR-12057

Accession MIMAT0046764
Description Bos taurus bta-miR-12057 mature miRNA
Sequence 1 - ACUGGGAGUGGAAGGAGAGCC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884