miRBase entry: bta-mir-12054

Stem-loop bta-mir-12054


Accession
MI0038487
Description
Bos taurus bta-mir-12054 precursor miRNA


Sequence

ggggucuuuacaaagggggcugguccgcacggaggaauagcuuauaggCUGGAGGUGGGGAUGCAC
.(.((((((((...((((((((.(((.......))).)))))).....))....)))))))).)..

Structure
-g g        -aaa  -----      g   gc 
  g gucuuuac    gg     gggcug ucc  a
  | ||||||||    ||     |||||| |||  c
  C UAGGGGUG    UC     uucgau agg  g
CA G        GAGG  ggaua      a   ag 


Annotation confidence Not enough data
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Genome context
chr5: 57532078-57532143 [+]

Database links

Mature bta-miR-12054

Accession MIMAT0046761
Description Bos taurus bta-miR-12054 mature miRNA
Sequence 49 - CUGGAGGUGGGGAUGCAC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884