Stem-loop sequence bta-mir-2285da

Accession

MI0038432 (change log)

Description

Bos taurus miR-2285da stem-loop

Literature search

11 open access papers mention bta-mir-2285da
(15 sentences)

Stem-loop

   c          cua         -   cg 
5'  aaaaaguucg   ggguuuuuc aua  a
    ||||||||||   ||||||||| |||   
3'  uuuuucaagu   uccaaaagg uau  u
   u          aag         g   ua 

Deep sequencing

4957 reads, 38.4 reads per million, 73 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr8: 60435957-60436015 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038432

Mature sequence bta-miR-2285da

• Accession: MIMAT0046707
• Sequence: 38 - gaaaaccugaaugaacuuuuuu - 59
• Deep sequencing: 4557 reads, 73 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).