Stem-loop sequence bta-mir-2285cx

Accession

MI0038429 (change log)

Description

Bos taurus miR-2285cx stem-loop

Literature search

11 open access papers mention bta-mir-2285cx
(15 sentences)

Stem-loop

   ---       ug       u        ac 
5'    aaaaguu  uuugggu uuucugua  a
      |||||||  ||||||| ||||||||   
3'    uuuucaa  aaaccca aaagaugu  u
   agu       gu       c        cc 

Deep sequencing

422 reads, 3.57 reads per million, 56 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr9: 10648828-10648886 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038429

Mature sequence bta-miR-2285cx

• Accession: MIMAT0046704
• Sequence: 38 - aacacccaaaugaacuuuuuga - 59
• Deep sequencing: 49 reads, 18 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).