Stem-loop sequence bta-mir-2285cu

Accession

MI0038423 (change log)

Description

Bos taurus miR-2285cu stem-loop

Literature search

11 open access papers mention bta-mir-2285cu
(15 sentences)

Stem-loop

   ---    c            --      uac 
5'    aaaa guucguuugggu  uuuuug   c
      |||| ||||||||||||  ||||||    
3'    uuuu caagcagaccca  aaggac   g
   cgg    c            ua      ucu 

Deep sequencing

6546 reads, 24.6 reads per million, 65 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr12: 13963804-13963862 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038423

Mature sequence bta-miR-2285cu

• Accession: MIMAT0046698
• Sequence: 38 - auacccagacgaaccuuuuggc - 59
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).