Stem-loop sequence bta-mir-2285cp

Accession

MI0038412 (change log)

Description

Bos taurus miR-2285cp stem-loop

Literature search

11 open access papers mention bta-mir-2285cp
(15 sentences)

Stem-loop

   -       c             ugu   u 
5'  aaaaguu guuuagguuuuuc   aac u
    ||||||| |||||||||||||   |||  
3'  uuuucaa caaguccaaaagg   uug g
   a       a             ---   g 

Deep sequencing

3199 reads, 25.7 reads per million, 74 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chrX: 61070223-61070278 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038412

Mature sequence bta-miR-2285cp

• Accession: MIMAT0046687
• Sequence: 1 - aaaaguucguuuagguuuuucu - 22
• Deep sequencing: 731 reads, 74 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).