Stem-loop sequence bta-mir-2285co

Accession

MI0038411 (change log)

Description

Bos taurus miR-2285co stem-loop

Literature search

11 open access papers mention bta-mir-2285co
(15 sentences)

Stem-loop

   ---aaa    ug     a      ug   c 
5'       aguu  uucgg uuuuuc  uaa a
         ||||  ||||| ||||||  |||  
3'       ucaa  aaguc aaaaag  guu u
   gguuuc    gu     c      gu   u 

Deep sequencing

7392 reads, 40.3 reads per million, 72 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr21: 24963097-24963155 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038411

Mature sequence bta-miR-2285co

• Accession: MIMAT0046686
• Sequence: 38 - aaaaccugaaugaacucuuugg - 59
• Deep sequencing: 7329 reads, 73 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).