miRBase entry: bta-mir-2285ch

Stem-loop bta-mir-2285ch


Accession
MI0038396
Description
Bos taurus bta-mir-2285ch precursor miRNA

Literature search
11 open access papers mention bta-mir-2285ch
(15 sentences)

Sequence

32 reads, 5 reads per million, 24 experiments
uggccaaaaaguucguuugagcuuucuuauaccauggaaaAUCAAUGAACUUUUUGGCCAGC
(((((((((((((((((.((..(((((........))))).)))))))))))))))))))..

Structure
--                 u  gc     uau 
  uggccaaaaaguucguu ga  uuucu   a
  ||||||||||||||||| ||  |||||    
  ACCGGUUUUUCAAGUAA CU  aaagg   c
CG                 -  -A     uac 


Annotation confidence Not enough data
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Genome context
chr1: 123739555-123739616 [+]

Database links

Mature bta-miR-2285ch

Accession MIMAT0046671
Description Bos taurus bta-miR-2285ch mature miRNA
Sequence 41 - AUCAAUGAACUUUUUGGCCAGC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884