Stem-loop sequence bta-mir-2285cg

Accession

MI0038389 (change log)

Description

Bos taurus miR-2285cg stem-loop

Literature search

11 open access papers mention bta-mir-2285cg
(15 sentences)

Stem-loop

   --       -     a        ca   g 
5'   aaaaguu cauuc gguuuuuc  uaa a
     ||||||| ||||| ||||||||  |||  
3'   uuuucaa guaag ccaaaaag  auu u
   ag       a     a        ac   g 

Deep sequencing

406 reads, 18.6 reads per million, 70 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr24: 50706686-50706744 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038389

Mature sequence bta-miR-2285cg

• Accession: MIMAT0046665
• Sequence: 38 - aaaaccagaaugaaacuuuuga - 59
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).