Stem-loop sequence bta-mir-2285cf

Accession

MI0038387 (change log)

Description

Bos taurus miR-2285cf stem-loop

Literature search

11 open access papers mention bta-mir-2285cf
(15 sentences)

Stem-loop

   -       c              u   u 
5'  caaaguu guucggguuuuucc uag a
    ||||||| |||||||||||||| |||  
3'  guuucaa caagcccaaaaagg auu u
   u       a              c   g 

Deep sequencing

5750 reads, 21.1 reads per million, 71 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr1: 128884965-128885021 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038387

Mature sequence bta-miR-2285cf

• Accession: MIMAT0046663
• Sequence: 1 - caaaguucguucggguuuuuc - 21
• Deep sequencing: 5532 reads, 70 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).