miRBase entry: bta-mir-12002a

Stem-loop bta-mir-12002a


Accession
MI0038385
Description
Bos taurus bta-mir-12002a precursor miRNA


Sequence

reads, None reads per million, experiments
caaccaaagauuucacaugcuguacagccgauuaacuuuguuagagagCAUGUGGAAUUUUUAGUUGCU
((((.((((((((((((((((.(..(((.((......)))))..).)))))))))))))))).))))..

Structure
--    c                g ac   c  uu 
  caac aaagauuucacaugcu u  agc ga  a
  |||| |||||||||||||||| |  ||| ||   
  GUUG UUUUUAAGGUGUACga a  uug uu  a
UC    A                g ga   -  uc 


Annotation confidence Not enough data
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Genome context
chr5: 100833755-100833823 [-]

Database links

Mature bta-miR-12002a

Accession MIMAT0046661
Description Bos taurus bta-miR-12002a mature miRNA
Sequence 49 - CAUGUGGAAUUUUUAGUUGCU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26519053
    Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil
    Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM
    BMC Genomics (2015) 16:884