Stem-loop sequence bta-mir-2285cb

Accession

MI0038375 (change log)

Description

Bos taurus miR-2285cb stem-loop

Literature search

11 open access papers mention bta-mir-2285cb
(15 sentences)

Stem-loop

   -a                u    g   u 
5'   aaaaguucguuugggu uuuu uaa a
     |||||||||||||||| |||| ||| u
3'   uuuucaaguaggccca aaaa guu g
   gg                c    a   u 

Deep sequencing

13324 reads, 45.1 reads per million, 71 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr19: 41582164-41582221 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038375

Mature sequence bta-miR-2285cb

• Accession: MIMAT0046651
• Sequence: 38 - aacacccggaugaacuuuugg - 58
• Deep sequencing: 2 reads, 2 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).