Stem-loop sequence bta-mir-2285bz

Accession

MI0038370 (change log)

Description

Bos taurus miR-2285bz stem-loop

Literature search

11 open access papers mention bta-mir-2285bz
(15 sentences)

Stem-loop

   --aau         ug           aag 
5'      aaguucguu  gguuuuuccau   a
        |||||||||  |||||||||||    
3'      uucaaguaa  ucaaaagggua   u
   gguuu         gu           aug 

Deep sequencing

10726 reads, 55.6 reads per million, 72 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr13: 57596848-57596907 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038370

Mature sequence bta-miR-2285bz

• Accession: MIMAT0046646
• Sequence: 1 - aauaaguucguuuggguuuuu - 21
• Deep sequencing: 6540 reads, 62 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).