Stem-loop sequence bta-mir-2285bu-2

Accession

MI0038365 (change log)

Description

Bos taurus miR-2285bu-2 stem-loop

Literature search

11 open access papers mention bta-mir-2285bu-2
(15 sentences)

Stem-loop

   --     -  ug  ug        caaaa 
5'   aagaa uu  uu  gguuuuuc     g
     ||||| ||  ||  ||||||||     a
3'   uuuuu aa  aa  ccagaaag     u
   gg     c  gu  gu        uauug 

Deep sequencing

5357 reads, 37 reads per million, 73 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chr4: 63416641-63416698 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038365

Mature sequence bta-miR-2285bu

• Accession: MIMAT0046640
• Sequence: 37 - aagaccugaaugaacuuuuugg - 58
• Deep sequencing: 10698 reads, 74 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).