Stem-loop sequence bta-mir-2285bn

Accession

MI0038349 (change log)

Description

Bos taurus miR-2285bn stem-loop

Literature search

11 open access papers mention bta-mir-2285bn
(15 sentences)

Stem-loop

   -                au       uaaa 
5'  caaaaaguucauucag  uuuucca    a
    ||||||||||||||||  |||||||     
3'  guuuuucaaguaaguc  aaaaggu    u
   u                -c       caug 

Deep sequencing

12654 reads, 186 reads per million, 77 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Btau_5.0.1; GCA_000003205.6): chrX: 68054309-68054368 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0038349

Mature sequence bta-miR-2285bn

• Accession: MIMAT0046625
• Sequence: 39 - aaaaccugaaugaacuuuuugu - 60
• Deep sequencing: 10653 reads, 77 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:26519053 "Deep sequencing shows microRNA involvement in bovine mammary gland adaptation to diets supplemented with linseed oil or safflower oil" Li R, Beaudoin F, Ammah AA, Bissonnette N, Benchaar C, Zhao X, Lei C, Ibeagha-Awemu EM BMC Genomics. 16:884(2015).